Re: [PyMOL] Displaying Disulphide bonds using Pymol

2006-06-22 Thread Nagesh Chakka
Dear Joel, Thanks for you email. I now installed version 0.99 and my problem is solved. Regards Nagesh Joel Tyndall wrote: Dear Nagesh, If you upgrade to the latest version (0.99) there is an option do display the disulfides under the show menu J Nagesh Chakka wrote: Hi Jerome, Thanks

Re: [PyMOL] Displaying Disulphide bonds using Pymol

2006-06-22 Thread Joel Tyndall
Dear Nagesh, If you upgrade to the latest version (0.99) there is an option do display the disulfides under the show menu J Nagesh Chakka wrote: Hi Jerome, Thanks for the mail. The web address you gave is about obtaining information about Cys involved in bond formation. In my case, I do kno

Re: [PyMOL] Displaying Disulphide bonds using Pymol

2006-06-22 Thread Nagesh Chakka
Hi Jerome, Thanks for the mail. The web address you gave is about obtaining information about Cys involved in bond formation. In my case, I do know which pair of Cys are involved in it and this information is also provided in the PDB file but I am unable to display the bridge in the PyMOL view

Re: [PyMOL] Displaying Disulphide bonds using Pymol

2006-06-22 Thread Jerome Pansanel
Hello, You can find some documentation about sulfur bonds on this page: http://www.pymolwiki.org/index.php/Process_All_Files_In_Directory If you are not successfull by using this resource, don't hesitate to post again. Cheers, Jerome Pansanel Selon Nagesh Chakka : > Hello everyone, > I am una

[PyMOL] Displaying Disulphide bonds using Pymol

2006-06-22 Thread Nagesh Chakka
Hello everyone, I am unable to display disulphide bonds using PyMOL (version 0.97). My understanding is that PyMOL can connect Cys that are within bonding distance. The PDB file (ID 1AG2) defines residues involved in the SSBond formation. I also tried to use the command "bond" to connect the