Thanks, it was indeed due to the autodock plugin setting retain_order. That
would have taken me quite a while to debug on my own!
-Spencer
On Wed, Apr 22, 2015 at 6:03 PM, Matthew Baumgartner wrote:
> Hi,
>
> I had problems with the retain order setting as well. The autodock vina
> pulgin turns
Hi,
I had problems with the retain order setting as well. The autodock vina
pulgin turns it on. Unload the plugin to fix it, or manually set it
after plugins are loaded.
Matt
On 4/22/15 8:56 PM, Thomas Holder wrote:
> Hi Spencer,
>
> please check your retain_order setting, it should be off (de
Hi Spencer,
please check your retain_order setting, it should be off (default). If it's on,
also check your pymolrc if you're setting it there.
http://www.pymolwiki.org/index.php/Retain_order
http://www.pymolwiki.org/index.php/Pymolrc
Cheers,
Thomas
On 22 Apr 2015, at 20:39, Spencer Bliven
I'm working on a script which involves joining two objects together, which
I do using the create command. The input objects have different chain
identifiers, but identical residue numbers. When I create the joined
object, I would expect all atoms from the first object to be added,
followed by all a
