Re: [PyMOL] JyMOL vs JSMol

2015-12-15 Thread Robert Hanson
I guess I should chime in here. JSmol does read (some fraction of) PyMOL session files. To be sure it has not been a priority to keep up to date with all the amazing PyMOL capabilities, but certainly as a proof of concept it has worked well, and it would be great to collaborate on this to improve

Re: [PyMOL] JyMOL vs JSMol

2015-12-15 Thread H. Adam Steinberg
Wow!!! do I need to apologize for for stating "that I could not use all my PyMOL files in Jmol!" I just threw some very complicated .PSE files at Jmol and it opened them all competently (so far)! I am very impressed and elated that I will not have to rebuild all of these files form scratch.

Re: [PyMOL] JyMOL vs JSMol

2015-12-15 Thread Robert Hanson
Don't worry. No apology necessary. It's a closely held secret that JSmol can do this. In any case, trust me, you will find plenty that JSmol cannot handle. There are many mysteries of the PSE format that I could only guess at. Enjoy! ​

[PyMOL] JyMOL vs JSMol

2015-12-14 Thread H. Adam Steinberg
I looked up JyMOL and found the basic definition but need more details. Can someone give me a link or provide the info? Currently using JSMol but that is limited in what it can do and I cannot use any of my PyMOL files in JSMol. My Main question is, could I use JyMOL to replace JSMol? Or is