Hi,
I'm trying to run the align_all.py script
(http://pldserver1.biochem.queensu.ca/~rlc/work/pymol/align_all.py) in PyMol
running on Linux.
I've put the script in /opt/pymol/scripts, and in my .pymolrc file, I have the
following:
sys.path.append(/opt/pymol/scripts)
and if I print sys.path
Hi Jens,
the run command is not identical to the python import statement. It
does not search sys.path but takes an absolute or relative (from the
current working directory) file name.
Both of these will work:
PyMOLrun /opt/pymol/scripts/align_all.py
PyMOLimport align_all
See also:
