Re: [PyMOL] Scripting coloring method via own calculations

2017-02-14 Thread Tsjerk Wassenaar
Hey :) Just as sidenote, the spectrum command takes arbitrary color schemes. Just combine colors separated by underscores. Also fun in combination with set_color :) Cheers, Tsjerk On Feb 14, 2017 5:46 PM, "Robert Campbell" wrote: Hello Peleg, I think there are other possibilities, but my dat

Re: [PyMOL] Scripting coloring method via own calculations

2017-02-14 Thread Robert Campbell
Hello Peleg, I think there are other possibilities, but my data2bfactor.py script will do that for you. You create a file with whitespace-separated columns (spaces and/or tabs) in which each line contains: chain resi resn name data (i.e. chain, residue number, residue name, atom name and val

[PyMOL] Scripting coloring method via own calculations

2017-02-14 Thread Peleg Bar-Sapir
Hello, I wish to write a script that will take the molecule loaded in PyMol, and color the molecule according to values I will calculate using the molecules' parameters (in the end there will be one floating number per atom). Then, I would like to display that using surface mode. Could anyone dir