Jeff,

Extract the ligand into a new object, and then show the surface on that
object only:

extract lig, ligand-selection
show surface, lig

Cheers,
Warren

> -----Original Message-----
> From: pymol-users-boun...@lists.sourceforge.net 
> [mailto:pymol-users-boun...@lists.sourceforge.net] On Behalf 
> Of Jeff Taylor
> Sent: Wednesday, June 06, 2007 12:52 PM
> To: pymol-users@lists.sourceforge.net
> Subject: [PyMOL] Surface question
> 
> Hello-
> 
> I have a enzyme-ligand co-structure that I would like to 
> display with a surface representation of the ligand and 
> something different, sticks or cartoon, for the protein.  The 
> problem comes when I try to surface the ligand, only the 
> actual solvent exposed portion is shown, when I'd like to 
> show the surface for the entire ligand.  Is there a way to do 
> this via atom selection?  If not, what are the alternatives?  
> Split up the PDB file?
> 
> Thank you.
> 
> -Jeff Taylor
> 
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