Hi Jason,
thanks for calling my attention to this--this is very good to know (I
looked up the camera/model space idea as well--very helpful)!
Jacob
On Mon, Jan 2, 2012 at 9:38 PM, Jason Vertrees
jason.vertr...@schrodinger.com wrote:
Jacob,
The easiest will be to use matrix_copy. All objects
Jacob,
Thomas Holder apprised me of a detail that effected the cealign code
(I used transform_selection instead of transform_object). This code
has been updated in the open-source repository; matrix_copy should now
work after aligning with cealign.
Cheers,
-- Jason
On Tue, Jan 3, 2012 at 1:11
Jacob,
The easiest will be to use matrix_copy. All objects start out with
their object matrix set to the identity. One you drag them around or
move them through an alignment, their matrices change. You can then
easily copy one object's matrix onto another object.
Cheers,
-- Jason
On Thu, Dec
Dear List,
I want to superpose a series of 30 states on another (single-state)
model in the following way:
--Superpose the best (closest-fitting) state first. (I know which one this is)
--Output that transformation matrix
--Transform other states by same matrix to preserve states'
Hi Jacob,
regarding alignto and states' iter-relations, this has recently been
fixed in open-source pymol.
align and super both take arguments mobile_state and
target_state and also preserve states' iter-relations.
Example:
align 1d7q, 2oqk, mobile_state=7, target_state=1
The matrix you get
