Hi Abhik,
Try this (with PyMOL 2.1 or newer):
load avg.pdb
loadall frame*.pdb
extra_fit (frame*) & guide, avg
multifilesave {name}-aligned.pdb, frame*
https://pymolwiki.org/index.php/load
https://pymolwiki.org/index.php/loadall
https://pymolwiki.org/index.php/extra_fit
Original Message
Subject: alignment of frame
From:abhik.gh...@bose.res.in
Date:Thu, August 9, 2018 3:02 pm
To: pymol-users@lists.sourceforge.net
--
Hello
Hello all
I want to align each frame pdb w.r.t a specific frame pdb. Let assume i
have 10 pdb files.I have another file "avg.pdb". I want to align each pdb
w.r.t "avg.pdb" file. I can do it manually using align command i.e align
1, avg. But is there any code or anything by which i can produce
