Re: [PyMOL] animation using pymol

2004-07-28 Thread Nat Echols
> areas of the protein that undergo movement and show general trends. There is > also a server at Yale (http://www.molmovdb.org/molmovdb/ ) that will perform > simulated annealing while morphing between two structures, thereby producing > intermediate structures that violate fewer protein restrain

Re: [PyMOL] animation using pymol

2004-07-28 Thread David Cooper
Hello, Frank. I have done this and created a web page to tell others how to do it. I used the Uppsala Software Factory program LSQMAN to generate structures that morph from one structure to another. This is quick and easy and can be done on your own computer. The intermediate structures shou

[PyMOL] animation using pymol

2004-07-27 Thread S. Frank Yan
Hi, I have two static frames of a loop structure, one is in an open form, the other is in closed form. I would like to make an animation which shows the transformation movement from open to closed. I was wondering if Pymol can handle this. Thanks, Frank