Re: [PyMOL] new to pymol

2015-08-28 Thread Osvaldo Martin
Hi Celestine, Welcome to the PyMOL community! I am not sure what is your problem, could you please provide more details? Cheers, Osvaldo. On Fri, Aug 28, 2015 at 6:00 AM, Chi Celestine < chi.celest...@phys.chem.ethz.ch> wrote: > > Hi, > I am very new in pymol and will like to know how know

[PyMOL] new to pymol

2015-08-28 Thread Chi Celestine
Hi, I am very new in pymol and will like to know how know the display in the lower command line works. However, i can see how to make it active. I have pymol v1.7.6.4 Thanks Celestine -- ___

Re: [PyMOL] New to PyMol. Want to extract sequence from .pse file w/ colors.

2012-02-27 Thread Thomas Holder
Hi Shane, I have a script which saves a colored sequence in HTML format. See attachment. Example usage: run save_colored_fasta.py save_colored_fasta seq.html It should be possible to copy&paste the colored sequence from your browser to excel. Cheers, Thomas Shane Neeley wrote,

Re: [PyMOL] New to PyMol. Want to extract sequence from .pse file w/ colors.

2012-02-26 Thread Shane Neeley
Hi Pymol Network, > > I would appreciate someones help in extracting the sequence in the viewer > above the protein. I have gone through the sequence and changed AAs to > different colors based on their position. I would ideally like to be able > to copy that sequence with the colors that they are

[PyMOL] New to pymol

2002-02-05 Thread Stephen Adler
Hi, I want to build updated RPM's for pymol. I see that version 0.73 is on sourceforge. I also see that there are version 0.68 rpm packages for redhat. I also see that there is a version 0.77 of pymol binaries for windows. so, in order to get the most out of this rpm hack, what should I do? Shou