Re: [PyMOL] representing missing residues in pymol

2014-09-25 Thread ccp4 pymol
Dear Steinberg Thank you very much for the idea Best Regards Priyan On Thu, Sep 25, 2014 at 7:33 PM, H. Adam Steinberg < h.adam.steinb...@gmail.com> wrote: > This is not as simple as you would like but PyMOL does have the ability to > manually build in missing atoms. And this feature allows you

Re: [PyMOL] representing missing residues in pymol

2014-09-25 Thread H. Adam Steinberg
This is not as simple as you would like but PyMOL does have the ability to manually build in missing atoms. And this feature allows you to manually fill in missing sequences. I have used it many times to make a specific point, noting that the missing AAs were manually added to the figure. On Se

Re: [PyMOL] representing missing residues in pymol

2014-09-25 Thread ccp4 pymol
Thank you Thomas. Best Regards Priyan On Thu, Sep 25, 2014 at 5:23 PM, Thomas Holder < thomas.hol...@schrodinger.com> wrote: > Hi Priyan, > > unfortunately PyMOL doesn't have such functionality to include missing > atoms in the sequence viewer, neither does it read SEQRES records. > > Cheers, >

Re: [PyMOL] representing missing residues in pymol

2014-09-25 Thread Thomas Holder
Hi Priyan, unfortunately PyMOL doesn't have such functionality to include missing atoms in the sequence viewer, neither does it read SEQRES records. Cheers, Thomas On 21 Sep 2014, at 23:28, Priyadarshan wrote: > Hello everyone > > Many a times we have structures solved with residues missin

[PyMOL] representing missing residues in pymol

2014-09-21 Thread ccp4 pymol
Hello everyone Many a times we have structures solved with residues missing as no electron density was seen. The complete sequence information is given in the SEQRES section of PDB. Is there a way in which we can identify the missing residues readily when we turn on the sequence feature by may be