Hi Dan and Thomas,
### Had to send message again due to size restriction, now image can be found a
link ###
Perhaps this will do the trick,
Show the protein as surface and cartoon then set the surface to almost
invisible:
set transparency, 0.99
Then set the surface transparency to be angle de
Hi Dan,
I think in PyMOL you can only do this in two steps and compose the two images,
e.g. with ImageMagick.
# white background
bg white
# step 1
as surface
set ray_trace_mode, 2
png surface.png, ray=1
# step 2
hide surface
show cartoon
set cartoon_cylindrical_helices
set ray_trace_mode, 1
pn
Hello,
I'm working with some cryo-EM density and I'm trying to get my isosurface
or volume (whichever's easier) to display transparent except for the curves
and turns of the density.
similar to this (done in chimeraX) https://imgur.com/a/lZuG8gD
Does anyone know if this is possible?
thanks
~Dan
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