Re: [PyMOL] Assign secondary structure on group

2015-03-13 Thread Thomas Holder
The latest update to SVN fixes this. Cheers, Thomas Thomas Holder wrote, On 03/06/15 15:35: > Hi Matt, > > thanks for the bug report. If you use the command line instead, it > works if you put the group name in parenthesis, which forces PyMOL to > treat it as an atom selection: > > PyMOL> dss

Re: [PyMOL] Assign secondary structure on group

2015-03-06 Thread Thomas Holder
Hi Matt, thanks for the bug report. If you use the command line instead, it works if you put the group name in parenthesis, which forces PyMOL to treat it as an atom selection: PyMOL> dss (nameofgroup) Cheers, Thomas On 06 Mar 2015, at 14:53, Matthew Baumgartner wrote: > Hi, > I'm using p

Re: [PyMOL] assign secondary structure?

2003-12-17 Thread Robert Campbell
* Michael Bovee [2003-12-16 14:27] wrote: > Hmm. When I try this I get a syntax error: > __ > PyMOL>load EcHRSade.pdb > Executive: object "EcHRSade" created. > PyMOL>hide > PyMOL>show cartoon > PyMOL>dss EcHRSade > Traceback (most recent call last)

RE: [PyMOL] assign secondary structure?

2003-12-11 Thread Warren L. DeLano
Michael, Unfortunately PYMOL/dss doesn't generate quite enough information to recreate PDB SHEET and HELIX records. PyMOL (like other programs) simplifies the secondary structure concept down to a per-residue property. There is no such thing as a sheet or helix in PYMOL, but merely sets