Re: [PyMOL] Anaglyph colours sorted (kind of)

2013-06-27 Thread Gary Hunter
, 26 June 2013 21:53 To: Gary Hunter gary.hun...@um.edu.mt Cc: Thomas Holder thomas.hol...@schrodinger.com, pymol-users@lists.sourceforge.net pymol-users@lists.sourceforge.net Subject: Re: [PyMOL] Anaglyph colours sorted (kind of) Hi Gary, 1) do not use a black background Agreed. Something like

Re: [PyMOL] Anaglyph colours sorted (kind of)

2013-06-27 Thread Jason Vertrees
, pymol-users@lists.sourceforge.net pymol-users@lists.sourceforge.net Subject: Re: [PyMOL] Anaglyph colours sorted (kind of) Hi Gary, 1) do not use a black background Agreed. Something like gray works well in my experience. Don't forget in techniques like anaglyph and chromadepth color takes

Re: [PyMOL] Anaglyph colours sorted (kind of)

2013-06-27 Thread Thomas Holder
Hi Gary Jason, two more things to add: Optimized anaglyph is not available in immediate mode rendering. You can reset all settings like this: PyMOL reinitialize settings Cheers, Thomas Jason Vertrees wrote, On 06/27/13 15:01: Hi Gary, I think you misunderstood. First, with a good

Re: [PyMOL] Anaglyph colours sorted (kind of)

2013-06-26 Thread Gary Hunter
Thanks for the reply. Of course you are correct that anaglyph in Pymol is 'optimised' for red/cyan glasses, despite the fact that the Pymol wiki says stereo mode 10 is for green/magenta ones (which is where I got the idea when it all went wrong for me). I have a learned a few things not to do in

Re: [PyMOL] Anaglyph colours sorted (kind of)

2013-06-26 Thread Jason Vertrees
Hi Gary, 1) do not use a black background Agreed. Something like gray works well in my experience. Don't forget in techniques like anaglyph and chromadepth color takes on another meaning–it encodes depth or separation. It's useful to keep this in mind. 2) do not use setting rendering