Re: [PyMOL] dimer

2007-03-27 Thread Bandaranayake, Rajintha
e.net [mailto:pymol-users-boun...@lists.sourceforge.net] On Behalf Of jonathan sheehan Sent: Tuesday, March 27, 2007 10:40 AM To: pymol-users@lists.sourceforge.net Subject: Re: [PyMOL] dimer On 3/22/07, Bandaranayake, Rajintha wrote: > symexp sym=pdb,(pdb),4.0 # Creates symmetry partners withi

Re: [PyMOL] dimer

2007-03-27 Thread jonathan sheehan
On 3/22/07, Bandaranayake, Rajintha wrote: symexp sym=pdb,(pdb),4.0 # Creates symmetry partners within 4 A of molecule pdb Very nice. Is there a way to do this using the BIOMT records?

Re: [PyMOL] dimer

2007-03-22 Thread Bandaranayake, Rajintha
Hi Lisa, Easiest would be to click on the 'A' button, select 'generate' and select 'symmetry mates'. From there you can select within how many Angstroms you want your symm molecules to be displayed. From the symmetry related molecules that get displayed you can select the one that completes the

Re: [PyMOL] dimer interface

2005-04-15 Thread Robert Campbell
Alex, * Alex Dajkovic [2005-04-15 10:30] wrote: > Dear all, > > I have a structure of a dimer and would like to see the surface at the > interface of the two proteins. Is there a way to do this in PyMol? Say the object has chains A and B: create chainA, object & c. a create chainB, objec