I found the receipes on your homepage to install PyMol on Macs kind of
convoluted, so here is what I figured after some working hours:
Installation on Mac-OsX 10.2
1) Download fink from www.apple.com and install
2) add source /sw/bin/init.csh to /etc/csh.login to let the system know about
fink
Hi All-
I'll ask my related question first: does anyone know if/when
electrostatic calculations might be incorporated into pymol? Or if you
can import calcs from another (hopefully free) program?
Unrelated question: does anyone know of a secondary structure prediction
program that outputs
Bartholomeus,
You have run into limitations in PyMOL's handling of single objects.
The answer to both these questions is to split your molecule into multiple
object and color/show independently. Use the create command to make copies,
and then use alter to reassign secondary structure codes
Anthony,
I agree that we need one, but it doesn't currently exist. The same can be said
for surface calculations, especially when you've loaded a 500 frame MD
trajectory and accidentally show surface (doh!).
My advice: save sessions often and make liberal use of PyMOL's logging
capability.
