[PyMOL] python as a satellite virus

2003-04-30 Thread wgscott
Coincidently that was the exact same program that hosed my python installation too. I had set up my computer to run the python based AutoDock Tools interface to the docking program AutoDock. The installer for this program puts its own copy of python as a subdirectory in the main application

Re: [PyMOL] python as a satellite virus

2003-04-30 Thread Terry M. Gray
At 10:50 AM -0700 4/30/03, wgsc...@chemistry.ucsc.edu wrote: Coincidently that was the exact same program that hosed my python installation too. I had set up my computer to run the python based AutoDock Tools interface to the docking program AutoDock. The installer for this program puts its

RE: [PyMOL] RE: Stereo pictures, light vector and shadows

2003-04-30 Thread Warren L. DeLano
Yep, I blew it -- neglected to check my work. Scratch all of my previous emails on the subject. The following function (turn_y_light.py) will correctly rotate the light in order to offset the effect of turn y,# def turn_y_light(rot): # assuming rot has angle in degrees rot_rad =

RE: [PyMOL] RE: Stereo pictures, light vector and shadows

2003-04-30 Thread Warren L. DeLano
(sorry, bad day continues) fixed type in the sample usage: # first, load the function from a .py file run turn_y_light.py # now use it... turn y,3 turn_y_light(3) ray png image1.png turn y,-6 turn_y_light(-6) ray png image2.png -- mailto:war...@delanoscientific.com Warren L. DeLano, Ph.D.

RE: [PyMOL] surface

2003-04-30 Thread Warren L. DeLano
Molecular (a discrete approximation to the Connolly surface). -- mailto:war...@delanoscientific.com Warren L. DeLano, Ph.D. Principal DeLano Scientific LLC Voice (650)-346-1154 Fax (650)-593-4020 -Original Message- From: pymol-users-ad...@lists.sourceforge.net