I was curious how I might prevent Pymol from re-ordering the atoms when
saving to a pdb file.
I am using a .pml script to output a large number of peptide files for
use in gaussian, but I need to preserve the atom
order in the output file.
I am not a python expert, but it seems like it should b
Hi Robert,
Actually, PDB atom ordering is deep inside the C core. I just
glanced at the code...it should be possible to add this capability, but
it is not a trivial task. There's currently no way to force PyMOL to do
this, and it may or may not make it into the next version.
For