Re: [PyMOL] question on cctbx and pymol

2005-08-23 Thread Sabuj Pattanayek
Hi, This worked. Thanks, ..Sabuj Robert Campbell wrote: prefixing a directory path. If you were like me and had: /usr/bin/python $PYMOL_PATH/modules/launch_pymol.py $* in your pymol.com file, then it would not run that cctbx_build/bin/python script. So you need to either change the abo

[PyMOL] MacPyMol won't load pdb files

2005-08-23 Thread Paul Fitzpatrick
I find that MacPyMol 0.98 will not load certain pdb files which are readily handled by other viewing programs. A common error message I receive is: File "/users/warren/pymol/products/MacPyMOL.app/pymol/modules/pymol/ parser.py", line 356, in parse exec(com2[nest]+"\n",pymol_names,pym

Re: [PyMOL] question on cctbx and pymol

2005-08-23 Thread Jianghai Zhu
Hi, I could not get cctbx work under either MacPymol or PymolX11Hybrid in Mac OS X. Anywhere I can find some instructions to get cctbx work in OS X? Thanks. Jianghai On Aug 23, 2005, at 1:18 PM, Sabuj Pattanayek wrote: Hi, This worked. Thanks, ..Sabuj Robert Campbell wrote: prefixing

[PyMOL] Distance labels not showing

2005-08-23 Thread Anton Vila-Sanjurjo
Hi, I just downloaded a PyMOL v0.98 standalone executable and have it running under Mandrake linux 10. I just noticed that the distance wizard does not show the actual distance labels. Does anybody know how to turn these on? Thanks, Anton Vila

[PyMOL] question on cctbx and pymol

2005-08-23 Thread Roger Dodd
Hi all, I hesitated to post this because I thought someone would have a more elegant solution, but I have got the draw_cell/symmops scripts working on windows with cctbx. I have had it working with all versions of PyMOL including the latest betas. I install PyMOL as usual in C:\Program Files\Delan

[PyMOL] E-D Wireless Glasses

2005-08-23 Thread Mathieu Coincon
Hi, I would like to know if someone tried these glassesunder windows/linux. http://www.edimensional.com/index.php?cPath=21 They are cheap and should work with non-pro graphics card and LCD (??). Thanks to share your experience. Mathieu Coincon Graduate Student Universite de Montreal

Re: [PyMOL] question on cctbx and pymol

2005-08-23 Thread Robert Campbell
Hi Sabuj, * Sabuj Pattanayek [2005-08-22 18:03] wrote: > Hi, > > Thank you for replying. > > In fact this is what I did. Gentoo automatically compiles pymol (pymol > ebuild) with all required dependencies against the system-wide > python-2.4.1. I then manually installed cctbx, did "source >

Re: [PyMOL] E-D Wireless Glasses

2005-08-23 Thread Michael Kutz
hmmmmost likely the IR emmiter is connected to the v-sync on the SVGA port w/t Active3D/OpenGL interperter software to produce the left eye/right eye images. Some of the ones like this one that i have seen only works with Active3D based software. AND not all active3d software will work. (d