Hello all pymol users
I am new to pymol and trying to open a .xplor map file in pymol to get the
electron density map of publication grade.
The command i write for pymol to open the file and show electron density
map is -
1) I convert ccp4 .map file into the .xplor file through mapman.
# mymap.
2008/9/26 Jhon Thomas :
> Hello all pymol users
>
> I am new to pymol and trying to open a .xplor map file in pymol to get the
> electron density map of publication grade.
> The command i write for pymol to open the file and show electron density
> map is -
>
> 1) I convert ccp4 .map file into the
2008/9/26 Jhon Thomas :
> hello Mr. Fredslund
>
> I tried the way you have written but it is not working--
>
> map file name - test_map.xplor
> load test_map.xplor
>
> isomeah map, test_map.xplor, 2.0, site, carve=1.6
>
> Is this is the correct of writing the command
Dear Mr. Thomas
Ok, some basi
Jhon,
all the newer builds of PyMol are able to read ccp4 maps, no need to convert to
xplor format.
As far as your commands are concerned, you are almost there.
Try this:
load mymap.ccp4, format=ccp4, mymap
isomesh map, mymap, 2.0, site, carve=1.6
were map is the name of the map graphical obje
