[PyMOL] Editing map visualisation

2011-04-28 Thread Harmer, Nicholas
Dear Pymol users, I am trying to edit an electron density map, so that the "chickenwire" is less dense (i.e. a greater spacing between each line on the contour surface). I looked through all of the settings for mesh, and coul not find a suitable parameter to change. Is it possible to alter this

[PyMOL] pymol autodock plugins

2011-04-28 Thread lina
Hi, I met such issue Error: 1 Exception in Tk callback Function: > (type: ) Args: () Traceback (innermost last): File "/usr/lib/python2.6/dist-packages/Pmw/Pmw_1_3/lib/PmwBase.py", line 1747, in __call__ return apply(self.func, args) File "/usr/local/lib/python2.6/dist-packages/pmg_t

Re: [PyMOL] Editing map visualisation

2011-04-28 Thread Jason Vertrees
Hi Nicolas, Use map_halve or map_double depending on what you want, less or more wire density, respectively: # get a map fetch 1ejg, type=2fofc, async=0 # make an isomesh isomesh ejgMesh, 1ejg, 1.8 Once the mesh is shown, type the following command to halve the wire density: map_halve ejgMe