Hej everybody,
I would like to start to write an own PyMol modul.
Therefore I thougth it would be interesting to use the pymol2 package.
But here I encounter a problem starting the GUI.
Can you spot what is missing here?
my code:
import pymol2
p1 = pymol2.PyMOL()
p1.start
Hi Benjamin,
You found some ancient piece of API and I'm not sure if it ever was functional.
Since the Tcl/Tk GUI is deprecated, we'll probably just remove that broken
startWithTclTk method.
The pymol2 module is a low level interface and doesn't provide a GUI out of the
box. It's also little u
Hi Abhik,
Assuming you're talking about a ramp-colored surface. You can update the ramp
from the "C" color menu (e.g.: C > grayscale), or from the command line:
PyMOL> ramp_update yourramp, color=grayscale
See also:
https://pymolwiki.org/index.php/Ramp_New
Cheers,
Thomas
> On Oct 13, 2018,
Hi Itamar,
Have you compiled PyMOL yourself? If yes, have you installed PyQt5? See
https://pymolwiki.org/index.php/Linux_Install#Requirements
Cheers,
Thomas
> On Oct 10, 2018, at 9:11 AM, Itamar Kass wrote:
>
> Hi,
>
> I am using Pymol 2.1.0 on Ubuntu 18.04. When run, it opens two windows
On 15-Oct-2018 05:44, Thomas Holder wrote:
Hi Itamar,
Have you compiled PyMOL yourself? If yes, have you installed PyQt5?
See https://pymolwiki.org/index.php/Linux_Install#Requirements
When 2.3.0a was built on Linux using the wiki's build method there were
no issues getting it to pick up PyQt
Dear Thomas,
I have used the one from the ubuntu repositories. Is it preferably to
manually compile it?
All the best,
Itamar
> Hi Itamar,
>
> Have you compiled PyMOL yourself? If yes, have you installed PyQt5? See
> https://pymolwiki.org/index.php/Linux_Install#Requirements
>
> Cheers,
> Thoma
