[PyMOL] select residues 4 angstrom away from the center atom or residue

2003-03-14 Thread eric hu
Hi, I wonder if pymol can do this kind of selection. Thanks. Eric __ Do you Yahoo!? Yahoo! Web Hosting - establish your business online http://webhosting.yahoo.com

[PyMOL] Secondary structure for superposed structures

2003-03-14 Thread Emma Hill
Hi, I'm a very new pymol user so bear with me if I've missed something obvious. I want to get nice cartoon representations of superposed structures - I obtained the rTools (from http://www.rubor.de/bioinf/pymol_rubor.html) as was mentioned previously on the mail-list and this is working fine

[PyMOL] Defining secondary structure

2003-03-14 Thread Jason Yano
Hi all, I have a script that I wrote to define the secondary structure of my protein. For some strange reason when I run the script, pymol does not recognize he commands: Parsing-Error: missing required argument: selection PyMOLalter A/361:366/, ss='L' Parsing-Error: missing required argument: