[PyMOL] problems updating Mandrake packages
Hello, I'm the maintainer for the pymol package in Mandrake Linux. I recently updated it to 0.90, but it won't run now. I'm not a python expert, so maybe someone here could help me interpret the following error? [aus...@gamma373-165 SOURCES]$ pymol.com Traceback (most recent call last): File "/usr/lib/python2.3/site-packages/pymol/__init__.py", line 92, in ? import pymol File "/usr/lib/python2.3/site-packages/pymol/__init__.py", line 300, in ? import _cmd ImportError: /usr/lib/libpng.so.3: undefined symbol: deflate We're currently using python 2.3, pil 1.1.4, libpng 1.2.5. Any suggestions would be appreciated, as I'm supposed to have this working by Wednesday. I'm not on the list, so a cc would also be appreciated. Thanks, Austin -- Austin Acton Hon.B.Sc. Synthetic Organic Chemist, Teaching Assistant Department of Chemistry, York University, Toronto MandrakeClub Volunteer (www.mandrakeclub.com) homepage: www.groundstate.ca
RE: [PyMOL] linker errors on win32?
Tina, "layer0/MemoryCache.c" is missing from the list of sources in the setup.py file. If you add that in right after the "layer0/MemoryDebug.c", it should build. Sorry about that! Cheers, Warren -- mailto:war...@delanoscientific.com Warren L. DeLano, Ph.D. Principal Scientist DeLano Scientific LLC Voice (650)-346-1154 Fax (650)-593-4020 > -Original Message- > From: pymol-users-ad...@lists.sourceforge.net [mailto:pymol-users- > ad...@lists.sourceforge.net] On Behalf Of Tina Li > Sent: Friday, August 22, 2003 10:31 AM > To: pymol-users@lists.sourceforge.net > Subject: [PyMOL] linker errors on win32? > > Hello, > > I was following instructions in setup/INSTALL.win32 (as in pymol-0_90- > src.tgz) > to build PyMOL. I have all the external components (glut, zlib, libpng) in > place. When I tried > > python setup.py build > > It generated linker errors: > > C:\Program Files\Microsoft Visual Studio\VC98\BIN\link.exe /DLL /nologo > /INCREME > NTAL:NO /LIBPATH:win32/lib /LIBPATH:C:\Python22\libs opengl32.lib > glu32.lib > glut > 32.lib libpng.lib zlib.lib /EXPORT:init_cmd > build\temp.win32-2.2\Release\Block.o [...more .obj here...] > ... >Creating library build\temp.win32-2.2\Release\_cmd.lib and object > build\temp.win32-2.2\Release\_cmd.exp > Map.obj : error LNK2001: unresolved external symbol _MemoryCacheFree > MemoryDebug.obj : error LNK2001: unresolved external symbol > _MemoryCacheFree > Basis.obj : error LNK2001: unresolved external symbol _MemoryCacheFree > Ray.obj : error LNK2001: unresolved external symbol _MemoryCacheFree > Map.obj : error LNK2001: unresolved external symbol _MemoryCacheMalloc > MemoryDebug.obj : error LNK2001: unresolved external symbol > _MemoryCacheMalloc > Basis.obj : error LNK2001: unresolved external symbol _MemoryCacheMalloc > Ray.obj : error LNK2001: unresolved external symbol _MemoryCacheMalloc > Map.obj : error LNK2001: unresolved external symbol _MemoryCacheCalloc > MemoryDebug.obj : error LNK2001: unresolved external symbol > _MemoryCacheRealloc > main.obj : error LNK2001: unresolved external symbol _MemoryCacheDone > main.obj : error LNK2001: unresolved external symbol _MemoryCacheInit > build\lib.win32-2.2\pymol\_cmd.pyd : fatal error LNK1120: 6 unresolved > externals > > error: command '"C:\Program Files\Microsoft Visual > Studio\VC98\BIN\link.exe"' > failed with exit status 1120 > > I wonder if I'm missing a particular library. > > > Thanks much, > > Tina > > > > > --- > This SF.net email is sponsored by: VM Ware > With VMware you can run multiple operating systems on a single machine. > WITHOUT REBOOTING! Mix Linux / Windows / Novell virtual machines > at the same time. Free trial click > here:http://www.vmware.com/wl/offer/358/0 > ___ > PyMOL-users mailing list > PyMOL-users@lists.sourceforge.net > https://lists.sourceforge.net/lists/listinfo/pymol-users
[PyMOL] linker errors on win32?
Hello, I was following instructions in setup/INSTALL.win32 (as in pymol-0_90-src.tgz) to build PyMOL. I have all the external components (glut, zlib, libpng) in place. When I tried python setup.py build It generated linker errors: C:\Program Files\Microsoft Visual Studio\VC98\BIN\link.exe /DLL /nologo /INCREME NTAL:NO /LIBPATH:win32/lib /LIBPATH:C:\Python22\libs opengl32.lib glu32.lib glut 32.lib libpng.lib zlib.lib /EXPORT:init_cmd build\temp.win32-2.2\Release\Block.o [...more .obj here...] ... Creating library build\temp.win32-2.2\Release\_cmd.lib and object build\temp.win32-2.2\Release\_cmd.exp Map.obj : error LNK2001: unresolved external symbol _MemoryCacheFree MemoryDebug.obj : error LNK2001: unresolved external symbol _MemoryCacheFree Basis.obj : error LNK2001: unresolved external symbol _MemoryCacheFree Ray.obj : error LNK2001: unresolved external symbol _MemoryCacheFree Map.obj : error LNK2001: unresolved external symbol _MemoryCacheMalloc MemoryDebug.obj : error LNK2001: unresolved external symbol _MemoryCacheMalloc Basis.obj : error LNK2001: unresolved external symbol _MemoryCacheMalloc Ray.obj : error LNK2001: unresolved external symbol _MemoryCacheMalloc Map.obj : error LNK2001: unresolved external symbol _MemoryCacheCalloc MemoryDebug.obj : error LNK2001: unresolved external symbol _MemoryCacheRealloc main.obj : error LNK2001: unresolved external symbol _MemoryCacheDone main.obj : error LNK2001: unresolved external symbol _MemoryCacheInit build\lib.win32-2.2\pymol\_cmd.pyd : fatal error LNK1120: 6 unresolved externals error: command '"C:\Program Files\Microsoft Visual Studio\VC98\BIN\link.exe"' failed with exit status 1120 I wonder if I'm missing a particular library. Thanks much, Tina
[PyMOL] Back of surface
Dear all: I would like to know how to keep the back of a surface (cut via the slab) dark rather than white (when using a wite background) once I ray trace the image. Thank you in advance Jose