[PyMOL] Rendering artifacts?

2004-04-26 Thread Jason Vertrees
PyMolers, I've got my final scenes laid out, but when I rendered the move frames I got some weirdness in the final screens. The weirdness is that we have a gray background and have some spheres and sticks fade out; however, when they fade they don't go transparent - they go to a different color

RE: [PyMOL] Does (PDB) size really matter?

2004-04-26 Thread Warren DeLano
Hi Jason, I see you have hash_max set to 400 -- that's the problem. In empirical testing, I found that there is rarely a reason to go above 200 with this setting. Having a hash table that is too finely sampled is no better than having one too coarsely sampled. PyMOL's default of 100 is

[PyMOL] True Black?

2004-04-26 Thread pdoucett
Hello Pymoliacs, I have been playing around with the lighting and gamma settings, but can never get a true black. The black always shows up as grey. Does anyone know how to get black to be black? Pete D. UCLA Chemistry

[PyMOL] (no subject)

2004-04-26 Thread ELHAM MOHAMMADI
Hello! I have 2 questions: 1) What is the correct/common email address to send your questions on PyMOL? 2) I have downloaded PyMOL on a PC(microsoft windows XP)using the instructions posted on the PyMOL site. But I am not able to get input files form the Internet--I simply wanted to go to the

Re: [PyMOL] True Black?

2004-04-26 Thread Matt Franklin
On Monday, April 26, 2004, at 04:19 PM, pdouc...@chem.ucla.edu wrote: Hello Pymoliacs, I have been playing around with the lighting and gamma settings, but can never get a true black. The black always shows up as grey. Does anyone know how to get black to be black? Pete D. UCLA Chemistry