[PyMOL] light source inside a molecule??

2004-09-09 Thread AVila
I'm trying to render a 70S ribosome molecule (about 140,000 atoms) with povray by using a "make_pov.py" script as the one described by Scott Classen earlier on in this thread. I got the whole process to work with a line model of the 70S but when I create a cartoon model of the ribosome pymol crash

[PyMOL] Latest beta

2004-09-09 Thread Warren DeLano
PyMOL Users who: 1. don't normally need to share session files with others 2. want to load a lot of structures into PyMOL 3. like living on the bleeding edge 4. will provide feedback on problems encountered may wish to try the latest 0.98beta05 executables for Win/Linux/Mac-X11 posted

[PyMOL] png without gui

2004-09-09 Thread Gabor E. Tusnady
Dear pymolers, I would like to generate pictures about my molecules using only command line mode (-c). I found a description in the archives using the cmd.ray(width,height) command. Unfortunately, ray command does not render compiled graphics objects, used in my python script, therefore the genera