Hi, I wonder if people can give a summary of how pymol makes movies out
of gromacs trr (or xtc) files without having to use all the individual
frame pdb files. Thanks!
Eric
Blanton,
My question is where do I obtain the maloc-0.1-2.tar.gz file?
Mike Holst (author of MALOC) has it available for download at
"http://scicomp.ucsd.edu/~mholst/codes/maloc/#download";. Having never
done a Mac OS X installation of PyMOL, APBS, or the APBS plugin, I'm not
certain what'
Hi
I am pretty new using PyMol but it is really the best software i have ever
used from far! I love it, the pictures are so cute!
But i have a small question: i would like to use 2 different colors for a
transparent surface and the cartoon which is above, is it possible?
Thank you in adavce.
Gabrie
Ah, I see what was happening. I had done the following:
1. Loaded an NMR structure
2. Incremented state using VCR controls
3. Loaded a crystal structure (only one state)
4. Deleted the NMR structure object
5. Tried to save. I was still in state >1, so no coordinates were
present in the remaining
Using 0.98beta05 on Linux, the 'save' command does not work. Doing
either of
save some_filename.pdb
save some_filename.pdb, an_object
just produces a file containing "END".
Gareth
--
Gareth Stockwell
European Bioinformatics Institute
