Tom,
Because the number of atoms in the alignment can vary with each pairwise
structure comparison, the RMS number returned by align cannot be
considered valid criterion except perhaps if presented along with the
number of atoms in each comparison. E.g.:
RMS over X atoms
0.5 1451
0.3
Message: 6
Date: Thu, 29 Oct 2009 13:40:56 +0200
From: Thomas Evangelidis te8...@mbg.duth.gr
Subject: Re: [PyMOL] how to get RMSD from CEalign command
To: Andreas Forster docandr...@gmail.com
Cc: pymol-users@lists.sourceforge.net
Message-ID: 20091029134056.136077awqo817...@webmail.duth.gr