Re: [PyMOL] how to get RMSD from align command

2009-10-30 Thread Warren DeLano
Tom, Because the number of atoms in the alignment can vary with each pairwise structure comparison, the RMS number returned by align cannot be considered valid criterion except perhaps if presented along with the number of atoms in each comparison. E.g.: RMS over X atoms 0.5 1451 0.3

Re: [PyMOL] how to get RMSD from CEalign command

2009-10-30 Thread Jason Vertrees
Message: 6 Date: Thu, 29 Oct 2009 13:40:56 +0200 From: Thomas Evangelidis te8...@mbg.duth.gr Subject: Re: [PyMOL] how to get RMSD from CEalign command To: Andreas Forster docandr...@gmail.com Cc: pymol-users@lists.sourceforge.net Message-ID: 20091029134056.136077awqo817...@webmail.duth.gr