Hi Carsten,
Welcome and sorry for the delayed response, I was away at a training
camp last week. Unfortunately, PyMOL cannot handle alternate
conformations in the mutagenesis wizard. You can pick other atoms,
but not those with alternate locations.
Cheers
-- Jason
On Mon, May 17, 2010 at
Vivek,
I know of no way to easily set a dihedral angle in PyMOL. We should
consider making this easier in the future.
Thanks,
-- Jason
On Sat, May 22, 2010 at 9:25 PM, Vivek Ranjan vran...@gmail.com wrote:
Helllo,
I am using pymol to change dihedral angles in a polymer chain.
However,
Hi all,
Thanks a lot. It worked great.
Cheers,
Ariel
On Sat, 2010-05-22 at 13:45 -0500, Jason Vertrees wrote:
Hi all,
Don't worry it's still there, just under a different command.
Stick_color, stick_transparency, etc are properties of bonds, so it's
best to now use 'set_bond' intead of
Hi All,
I have written a quick little script to jump through various frames from an MD
simulation loaded into PyMOL:
###
from pymol import cmd
import time
def jump (*args, **kwargs):
#Example: jump 1, 10, 20
#This will jump from frame 1
Dear Carsten,
On 17 May 2010 14:39, Carsten Siebenhaar csie...@gwdg.de wrote:
Hello, I'm new to this board.
I came across a certain problem with the mutagenesis tool. I got a pdb-file
with amino acids that are partly displayed as 2 rotamers (so one amino acid
displayed in two different ways
