On Mon, Oct 31, 2011 at 2:21 AM, James Starlight wrote:
> Dear PyMol users!
>
> I want to prepare my pdb structure for MD simulation with gromacs
You may ask in gmx list.
>
> 1- I want to place some CAP groups like ACE or NH2 to N and C termii of 1
> and last residue of my protein, respectyally.
Dear PyMol users!
I want to prepare my pdb structure for MD simulation with gromacs
1- I want to place some CAP groups like ACE or NH2 to N and C termii of 1
and last residue of my protein, respectyally.
I found possible option for this in the build- amono acids
buit creted via this way ACE or N
Dear Petro,
Text labels in PyMOL (http://pymolwiki.org/index.php/Label) are displayed
per atom, so the usual way is to make a pseudoatom (
http://pymolwiki.org/index.php/Pseudoatom) for each helix label you want to
make.
Using selections this can be pretty straight forward.
Let's say you have yo
Hi all.
I have a protein structure in cartoon representation. It has 5 helices
and iconnecting loops. I have colored 3 of the helices in to different
color. now i want to add text label to them. How can I do it?
Thanks.
Petro.
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