Hi guys.
I am trying to use the plugin: MSMShttp://www.pymolwiki.org/index.php/Msms on
a win machine.
The plugin is dependent on a shell script: pdb_to_xyzrn
But I cant execute it on a win machine, and I won't install cygwin.
Can someone help me convert the shell script to a python script?
Or
Case closed.
Thanks to Hongbo Zhu for a solution.
Best
Troels
2011/12/12 Troels Emtekær Linnet tlin...@gmail.com
Hi guys.
I am trying to use the plugin: MSMShttp://www.pymolwiki.org/index.php/Msms
on
a win machine.
The plugin is dependent on a shell script: pdb_to_xyzrn
But I cant
Hi Julian,
you were right, there was a problem with my graphical card. I updated the
drivers but still I'm having the same problem.
Also unsetting the shaders didn't bring any improvement.
Wow--that's cool enough to be a feature, not a bug. Just kidding,
we're looking into it.
Can you please
Julian,
Glad it works. I'll add a note to the PyMOLWiki about that.
Cheers,
-- Jason
On Mon, Dec 12, 2011 at 2:57 PM, Julian Zachmann
frankjulian.zachm...@uab.cat wrote:
Hi Jason,
finally I managed to solve the problem myself.
It was not a problem of pymol but of the drivers.
If anybody
Mark,
You could always simply edit the pdb file (remove the trans option). Simply
open up the pdb file in a text editor (gedit/notetab/wordpad) and delete the
lines corresponding to the trans form. The pdb file (compare with the mol or
mol2 files) is simple to edit manually. The others require
