Hi.
You probably want to make sure your file is somewhere in your system path.
write in pymol
import sys
print sys.path
Then locate a directory where you can store your file.
You can also make some kung-fu, and add to the PYTHONPATH:
You could have a start script something like this
#!/bin/bash
export FREEMOL=/xxx/software/pymolsvn/svnfreemol/freemol
export PYMOL_GIT_MOD=/xxx/software/pymolsvn/Pymol-script-repo/modules
export
PYTHONPATH=$PYTHONPATH:/xxx/software/x64/lib64/python2.6/site-packages/PIL
export
PYTHONPATH=$PYTHONPATH:/xxx/software/x64/lib64/python2.6/site-packages/lib-tk
export
PYTHONPATH=$PYTHONPATH:/xxx/software/x64/lib64/python2.6/site-packages/lib-dynload
export
PYTHONPATH=/xxx/software/pymolsvn/Pymol-script-repo/modules:$PYTHONPATH
export PYTHONPATH=/xxx/software/pymolsvn/Pymol-script-repo:$PYTHONPATH
export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/xxx/software/x64/lib/pymollib
export LIBGL_ALWAYS_INDIRECT=no
/usr/bin/python /xxx/software/pymolsvn/modules/pymol/__init__.py "$@"
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2012/7/24 Matthew Baumgartner <mp...@pitt.edu>
> Hi,
> I wrote a short script that I am going to use in pymol. I need to parse
> a json file and then display the contents in some manner. It works just
> fine in Ubuntu 12.04, but when I try it on OSX, it doesn't work. The
> problem that I am having is that when I try `import simplejson` or
> `import json` it throws an ImportError.
>
> I assume that this is related to the PYTHON_PATH variable, but thus far
> my google-fu has come up short.
> I've tried it in both pymol version 1.3 and 1.5.0.3.
>
> Any help would be appreciated.
>
> Thanks,
> Matt Baumgartner
>
>
> Technical Details:
> pymol 1.5.0.3 and 1.3
> OSX 10.6.8
>
>
>
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threat landscape has changed and how IT managers can respond. Discussions
will include endpoint security, mobile security and the latest in malware
threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/
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