[PyMOL] morph command questions

2014-05-20 Thread Dr. Mark Mayer
I have two questions about the morph command in PyMOL 1.7 1) Is it possible to keep atom label text displayed throughout the morph? I've run a script morphing from mol1 to mol2 with text associated with mol1, but the label disappears at the start of the morph. 2) Is it possible to have the

Re: [PyMOL] disable all screen output

2014-05-20 Thread Thomas Holder
Hi Osvaldo, I think you are looking for the suspend_updates setting. Cheers, Thomas On 19 May 2014, at 15:10, Osvaldo Martin aloctavo...@gmail.com wrote: Hello everyone! I working on a PyMOL plugin that performs a lot of selections and operations. I would like to avoid updating the

Re: [PyMOL] morph command questions

2014-05-20 Thread Thomas Holder
Hi Mark, both the labels and the distance lines should be visible in all states. Here a working example, tested with 1.7.0.0 and 1.7.0.5: fetch 1akeA 4akeA, async=0 align 1akeA, 4akeA morph mobj, 1akeA, 4akeA as ribbon enable 1akeA select sele1, resi 148 guide label sele1, resi distance dobj,

Re: [PyMOL] disable all screen output

2014-05-20 Thread Osvaldo Martin
Thanks Thomas, You are right. I just have added a couple of links to the suspend_updates setting in the wiki to make that option easier to find. Cheers, Osvaldo. On Tue, May 20, 2014 at 5:46 PM, Thomas Holder thomas.hol...@schrodinger.com wrote: Hi Osvaldo, I think you are looking for the