Re: [PyMOL] Is Ball Stick models of molecules possible?

2015-04-23 Thread bkpsusmitaa
Corrigendum: Are instead of Is in the title/header. as the cases could be(to add a comma) Apologies for the typos. Regards, Rajib -- BPM Camp - Free Virtual Workshop May 6th at 10am PDT/1PM EDT Develop your own process in

[PyMOL] PyMOL ball stick representation of imatinib in 2HYY

2015-04-23 Thread Brenton Horne
Hi, I recently read this reply (http://www.mail-archive.com/pymol-users@lists.sourceforge.net/msg13248.html) to another users' query on this list so I went to the PyMOL Wiki page hyperlinked in the answer and found this piece of code: preset.ball_and_stick(selection='all', mode=1) set_bond

Re: [PyMOL] PyMOL ball stick representation of imatinib in 2HYY

2015-04-23 Thread David Hall
preset.ball_and_stick('r. STI’) On Apr 23, 2015, at 12:52 PM, Brenton Horne brentonho...@ymail.com wrote: Hi, I recently read this reply (http://www.mail-archive.com/pymol-users@lists.sourceforge.net/msg13248.html

Re: [PyMOL] Is Ball Stick models of molecules possible?

2015-04-23 Thread Folmer Fredslund
Hi Rajib Yuktimmana, For the question about ball stick see this page on the wiki: http://www.pymolwiki.org/index.php/Ball_and_Stick HTH, Folmer 2015-04-23 7:41 GMT+02:00 bkpsusmitaa bkpsusmi...@gmail.com: Hi! So far we have been able to make only stick models for molecules. We now

[PyMOL] PLIP - A PyMOL related project

2015-04-23 Thread Sebastian Salentin
Dear all, we just published the Protein-Ligand Interaction Profiler (PLIP), a web service and open source command line tool for characterizing and visualizing all relevant non-covalent interactions between proteins and ligands in PDB structures. Web Service: