[PyMOL] PDB Format not correct for use in CHARMM
Hello everybody, I'm working with a protein-protein complex and am fixing some stuff. When I save the fixed complex as a pdb the PDB format is not the same as it was in the imported pdb files (there it was the same as the CHARMM default pdb format). In the saved pdb it changed the line position of atoms in the pdb file. Residues are ok but atoms in a given residue are mixed up. It also added addition TER's which I had to manually delete. So how would I specify the output PDB format to be the same as in the original imported pdbs (before manipulation), so same as CHARMM pdb format. Please help, Marko -- ___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
[PyMOL] Residue selection along coordinates on z-axis
Hello everyone! Could someone help me figure out, how I could do a residue selection along specific z-axis coordinates, for example from 6,377-7,139 on the z-axis, etc..Like that it selects all residues in that plane. Marko Sever, PhD student -- Check out the vibrant tech community on one of the world's most engaging tech sites, Slashdot.org! http://sdm.link/slashdot ___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
