[PyMOL] pymol beta31 segfault with nvidia

2005-12-06 Thread Dmitriy
rsion 0.99beta29 works fine with the same driver. tried on Fedora Core 4 with Mesa 6.2.1, beta31 works fine. so it seems to be a problem with nvidia driver. not sure about 7676. Thanks Dmitriy

[PyMOL] cvs version of pymol does not run

2005-12-06 Thread Dmitriy
import _cmd ImportError: /home/dim/tmp/pymol/lib/python2.4/site-packages/pymol/_cmd.so: undefined symbol: TypeInit What is this "TypeInit" ? beta29 compiles and runs on Mandriva 2006 and Fedora Core 4. Latest from cvs do not. Does anyone have the same problem? Thanks Dmitriy

[PyMOL] .xyz file loading problem from chempy module

2005-11-04 Thread Dmitriy
Hello everyone It seems to be a problem with loading an .xyz file as a chempy model. For example doing from chempy import io m = io.xyz.fromFile("some.xyz") gives: chempy: reading "some.xyz". Traceback (most recent call last): File "", line 1, in ? File &quo

[PyMOL] cmd.quit() kills pymol together with the external python launcher

2005-10-27 Thread Dmitriy
ram. Pymol ver. 20beta I think (latest from CVS) Help is really appreciated Thanks Dmitriy

[PyMOL] launching PyMol from a python function

2005-10-24 Thread Dmitriy Igor Bryndin
;pymol'): e.wait(0.01) Goes in an endless loop. I've tried print dir(__main__) just before this loop. When PyMol is launched not from a function, __main__ indeed have attributes '__main__' and 'pymol'. Launched from a function, there are no '__main__' or 'pymol', but 'funct'. I'll really appreciate any help or hints how make it possible to launch PyMol from a function or from a method of some class. Dmitriy

[PyMOL] PyMol segmentation fault while starting from external python program

2005-10-10 Thread Dmitriy Igor Bryndin
o sticks... Running it "python launch_demo.py" will wait for a second and return segmentation fault. If someone knows what's going on, please help me. Thanks Dmitriy Bryndin

[PyMOL] PyMol does not compile with python 2.4.1

2005-10-10 Thread Dmitriy Igor Bryndin
eone knows the way, it will be helpful. But the main question is WHY it does not compile. Is it somthing wrong with PyMol code? As much as I know, this parameter do additional code checks for things like buffer owerflow. Which itent to be useful. Thanks Dmitriy Bryndi