Re: [PyMOL] Cel shading in PyMOL

2015-01-13 Thread Thomas Holder
Hi Jacob  Osvaldo,

the ray tracer has cel shading as ray trace mode 3.

PyMOL set ray_trace_mode,  3
PyMOL ray

See also:
http://pymolwiki.org/index.php/Ray#Modes

Hope that helps.

Cheers,
  Thomas

On 13 Jan 2015, at 08:07, Osvaldo Martin aloctavo...@gmail.com wrote:

 Hi Jacob,
 
 What about the Goodsell-like representation from here?
 
 Cheers,
 
 Osvaldo.
 
 On Tue, Jan 13, 2015 at 7:29 AM, Jacob Lewis jl...@uowmail.edu.au wrote:
 
 Hi all,
 
 Has anyone figured out a good way to do Cel shading in pymol? Or even the 
 sort of variables to play with?
 
 Cheers,
 
 Jacob

-- 
Thomas Holder
PyMOL Principal Developer
Schrödinger, Inc.


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[PyMOL] Cel shading in PyMOL

2015-01-13 Thread Jacob Lewis
Hi all, 

Has anyone figured out a good way to do Cel shading in pymol? Or even the sort 
of variables to play with? 

Cheers, 

Jacob 
--
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Re: [PyMOL] Cel shading in PyMOL

2015-01-13 Thread Osvaldo Martin
Hi Jacob,

What about the Goodsell-like representation from here
http://www.pymolwiki.org/index.php/Gallery?

Cheers,

Osvaldo.

On Tue, Jan 13, 2015 at 7:29 AM, Jacob Lewis jl...@uowmail.edu.au wrote:

Hi all,

 Has anyone figured out a good way to do Cel shading in pymol? Or even the
 sort of variables to play with?

 Cheers,

 Jacob

 --
 New Year. New Location. New Benefits. New Data Center in Ashburn, VA.
 GigeNET is offering a free month of service with a new server in Ashburn.
 Choose from 2 high performing configs, both with 100TB of bandwidth.
 Higher redundancy.Lower latency.Increased capacity.Completely compliant.
 http://p.sf.net/sfu/gigenet
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​
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Re: [PyMOL] Cel shading in PyMOL

2015-01-13 Thread Shiven Shandilya

Hi Jacob,

If you have the right mix of display drivers and Pymol version, you can try 
GLSL shaders.

http://www.pymolwiki.org/index.php/GLSL_Shaders

Unfortunately, it does not work flawlessly across platforms and I have not 
invested any more time figuring it out because the shader system in Pymol still 
appears to be a work-in-progress.

Best,
Shiven


Shivender Shandilya,
Senior Post-Doc,
Schiffer Lab,
Dept. of Biochemistry  Molecular Pharmacology,
University of Massachusetts Medical School.
Worcester, MA 01605.


 On Jan 13, 2015, at 9:39 AM, Thomas Holder thomas.hol...@schrodinger.com 
 wrote:
 
 Hi Jacob  Osvaldo,
 
 the ray tracer has cel shading as ray trace mode 3.
 
 PyMOL set ray_trace_mode,  3
 PyMOL ray
 
 See also:
 http://pymolwiki.org/index.php/Ray#Modes
 
 Hope that helps.
 
 Cheers,
  Thomas
 
 On 13 Jan 2015, at 08:07, Osvaldo Martin aloctavo...@gmail.com wrote:
 
 Hi Jacob,
 
 What about the Goodsell-like representation from here?
 
 Cheers,
 
 Osvaldo.
 
 On Tue, Jan 13, 2015 at 7:29 AM, Jacob Lewis jl...@uowmail.edu.au wrote:
 
 Hi all,
 
 Has anyone figured out a good way to do Cel shading in pymol? Or even the 
 sort of variables to play with?
 
 Cheers,
 
 Jacob
 
 -- 
 Thomas Holder
 PyMOL Principal Developer
 Schrödinger, Inc.
 
 
 --
 New Year. New Location. New Benefits. New Data Center in Ashburn, VA.
 GigeNET is offering a free month of service with a new server in Ashburn.
 Choose from 2 high performing configs, both with 100TB of bandwidth.
 Higher redundancy.Lower latency.Increased capacity.Completely compliant.
 http://p.sf.net/sfu/gigenet
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GigeNET is offering a free month of service with a new server in Ashburn.
Choose from 2 high performing configs, both with 100TB of bandwidth.
Higher redundancy.Lower latency.Increased capacity.Completely compliant.
http://p.sf.net/sfu/gigenet
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