[PyMOL] Pymol segmentation fault - fedora core 1

2004-07-26 Thread Roger Dodd

Hi everyone,

I've recently updated to the 0.97 release of pymol and although it ran 
fine to start with, it's now generating a segmentation fault. I 
installed from the * pymol-0_97-bin-linux-libc6-i386.tgz* 
http://prdownloads.sourceforge.net/pymol/pymol-0_97-bin-linux-libc6-i386.tgz?download 
file into /usr/local/pymol and ran setup.sh. Then when running the 
pymol.com script I get the following:


./pymol.com: line 14: 31156 Segmentation fault  $PYMOL_PATH/pymol.exe $*

I'm not sure exactly what's causing this and any help would be 
appreciated. I've tried completely removing the pymol directory and 
reinstalling but I still get the same error.


Cheers

Roger



Re: [PyMOL] Pymol segmentation fault - fedora core 1

2004-07-26 Thread Filipe Maia
On Mon, 26 Jul 2004 10:40:47 +0100, Roger Dodd rb...@hermes.cam.ac.uk  
wrote:



Hi everyone,

I've recently updated to the 0.97 release of pymol and although it ran  
fine to start with, it's now generating a segmentation fault. I  
installed from the * pymol-0_97-bin-linux-libc6-i386.tgz*  
http://prdownloads.sourceforge.net/pymol/pymol-0_97-bin-linux-libc6-i386.tgz?download  
file into /usr/local/pymol and ran setup.sh. Then when running the  
pymol.com script I get the following:


./pymol.com: line 14: 31156 Segmentation fault   
$PYMOL_PATH/pymol.exe $*


I'm not sure exactly what's causing this and any help would be  
appreciated. I've tried completely removing the pymol directory and  
reinstalling but I still get the same error.


$PYMOL_PATH/pymol.exe $* - this looks suspicious.

Did you tried to compile pymol as a monolythic thing? I don't beleive that  
still works.

I use $PYMOL_PATH/ext/bin/python $PYMOL_PATH/modules/pymol/__init__.py $*

I'll send you my Rules.make and pymol.com.
I was able to build it simply with a symlink from ext to /usr




Cheers

Roger


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