[PyMOL] dock one protein into another?

[Richard Gillilan]

I'm having trouble figuring out how to use the edit mode in PyMol. I  
would like to dock an entire protein (a homodimer along with water)  
into another structure by rotating and translating manually.


Is there a way to move multiple molecules like this as a group?


Thanks

Richard Gillilan
MacCHESS

Re: [PyMOL] dock one protein into another?

[DeLano Scientific]

Richard,

Probably the easiest way to do this is with the drag command.  However,
all of the atoms to be drag must be contained within a single molecular
object.  It is not currently possible to move multiple objects at once using
the mouse.

drag object-name

Then move object with shift-(left or middle or right)-click-and-drag
actions.

Cheers,
Warren

 -Original Message-
 From: pymol-users-boun...@lists.sourceforge.net 
 [mailto:pymol-users-boun...@lists.sourceforge.net] On Behalf 
 Of Richard Gillilan
 Sent: Monday, January 22, 2007 1:48 PM
 To: pymol-users@lists.sourceforge.net
 Subject: [PyMOL] dock one protein into another?
 
 
 I'm having trouble figuring out how to use the edit mode in 
 PyMol. I would like to dock an entire protein (a homodimer 
 along with water) into another structure by rotating and 
 translating manually.
 
 Is there a way to move multiple molecules like this as a group?
 
 
 Thanks
 
 Richard Gillilan
 MacCHESS
 
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