(if feasible, I am brainstorming!)
Thanks again for your help and for your help in advance,
Mario
-Original Message-
From: Thomas Holder
Sent: Monday, June 15, 2020 9:37 AM
To: Mario Garcia Urena
Cc: pymol-users@lists.sourceforge.net
Subject: Re: [PyMOL] APBS plugin for Sugars
Hi
Hi Mario,
Incentive PyMOL 2.x includes regular APBS and PDB2QPR. You should be able to
manually edit the files there as well. For example with PyMOL 2.4.0 on Linux,
the AMBER force field data files can be found like this:
$ find . -name "AMBER.*"
Hi all,
I was trying to generate dipole moments with pymol using the APBS plugin. For
proteins I adapted a code and the dipole moments are correct and work just
fine, but for sugars it does not. I am well aware that the problem is that many
of the residues are not present in the AMBER force
