Re: [PyMOL] GIT'r Done

2009-05-06 Thread Michael Banck
On Mon, May 04, 2009 at 11:09:06PM +0200, Justin Lecher wrote:
> Waren points me to the fact, that it might be good to explain how to
> work with the github. I wrote a little howto, but there are alot more
> in the web, which can be easily be found via google. I think
> nonetheless it is a good starting point to contribute to our script
> repo.

Not sure whether it has been done yet, but it would also be good to
encourage script/plugin authors to properly copyright and license their
code, preferably with the same license that pymol has.

That way, the scripts/plugins could also potentionally shipped by
distributions as pymol-addons.


Michael

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Re: [PyMOL] GIT'r Done

2009-05-04 Thread Justin Lecher
Waren points me to the fact, that it might be good to explain how to work with 
the github. I wrote a little
howto, but there are alot more in the web, which can be easily be found via 
google. I think nonetheless it
is a good starting point to contribute to our script repo.

http://tinyurl.com/cy7wj8

If anyone has suggestions feel free to edit the howto. Questions about 
unresolved things are also welcome.

Thanks justin


-- 
Justin Lecher
Institute for  Neuroscience and Biophysics
INB 2 - Molecular Biophysics II
Research centre Juelich GmbH,
52425 Juelich,Germany
phone: +49 2461 61 5385




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Re: [PyMOL] GIT'r Done

2009-05-03 Thread Justin Lecher
Jason Vertrees schrieb:
> Justin,
> 
> Thanks for taking the initiative to import the Script Library into git. 
>   It's great to see more and more of the PyMOL community giving back.
> 
> Now users can simply get a copy of all the scripts with one easy git 
> command.  I posted some details below the main menu of the Script 
> Library (http://pymolwiki.org/index.php/Category:Script_Library) on git.
> 
> I expect that if the community adopts the idea then the PyMOLWiki will 
> be used for documentation, photos and information related to the 
> scripts, while git will hold the actual code.
> 
> Cheers,
> 
> -- Jason
> 
> 
> 

Hi all,

just to clarify. Everyone can push back things into the Github. You just have 
to create an account at
GitHub, deposit a public ssh key and use this clone command:

git clone g...@github.com:jlec/Pymol-script-repo.git


If have already checked out the repo using the public access, open 
REPO_ROOT/.git/config in your
favorite editor and change

[remote "origin"]
   url = git://github.com/jlec/Pymol-script-repo.git
   fetch = +refs/heads/*:refs/remotes/origin/*

to

[remote "origin"]
   url = g...@github.com:jlec/Pymol-script-repo.git
   fetch = +refs/heads/*:refs/remotes/origin/*


and everything is fine.



Thanks,

justin
-- 
Justin Lecher
Institute for Neuroscience and Biophysics
ISB 3 - Institute for structural biochemistry
Research Centre Juelich GmbH,
52425 Juelich,Germany
phone: +49 2461 61 5385




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[PyMOL] GIT'r Done

2009-05-02 Thread Jason Vertrees
Justin,

Thanks for taking the initiative to import the Script Library into git. 
  It's great to see more and more of the PyMOL community giving back.

Now users can simply get a copy of all the scripts with one easy git 
command.  I posted some details below the main menu of the Script 
Library (http://pymolwiki.org/index.php/Category:Script_Library) on git.

I expect that if the community adopts the idea then the PyMOLWiki will 
be used for documentation, photos and information related to the 
scripts, while git will hold the actual code.

Cheers,

-- Jason




> Message: 5
> Date: Fri, 01 May 2009 13:34:57 +0200
> From: Justin Lecher 
> Subject: [PyMOL] GitHub for pymol-scripts
> To: pymol-users@lists.sourceforge.net
> Message-ID: <49fade61.4090...@fz-juelich.de>
> Content-Type: text/plain; charset=UTF-8;  format=flowed
> 
> Dear all,
> 
> yesterday I created a GitHub to collect and enlarge the scripts collection 
> for pymol. I started to 
> import the already posted ones from the pymolwiki.org.
> In my opinion this is a smooth way to maintain the code of the scripts and it 
> is a good addition to the 
> wiki pages. I'd like everyone to check out the repo and contribute.
> 
> http://github.com/jlec/Pymol-script-repo/tree/master
> 
> If you have problem with git, just mail me.
> 
> Thanks justin
> 
> 
> -- Justin Lecher Institute for Neuroscience and Biophysics ISB 3 - Institute 
> for structural biochemistry Research Centre Juelich GmbH, 52425 
> Juelich,Germany phone: +49 2461 61 5385 

-- 
Jason Vertrees, PhD

Boston U. -- jas...@bu.edu
Dartmouth -- j...@cs.dartmouth.edu

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