Re: [PyMOL] Intel Video - Please Respond

2012-05-03 Thread Jason Vertrees
Michael,

The next tarball I upload will probably be for v1.5.2 or v1.6
depending on progress. That is a few months away. We will continue to
push minor changes in the meantime.

Cheers,

-- Jason

On Wed, May 2, 2012 at 12:16 PM, Michael Banck mba...@debian.org wrote:
 Hi,

 On Mon, Apr 09, 2012 at 11:01:35AM -0400, Jason Vertrees wrote:
 The latest commit (3995) should fix this for the Intel card. Try
 pulling the latest (3996) from the open source branch.

 That worked splendidly, I am uploading pymol-1.5.0.1 with some
 subversion changesets to Debian now.

 Are you going to roll/upload a 1.5.0.4 version with those changes?  That
 would be great.  Or does the addition of the plugin manager mean
 subversion is now en route to 1.6 or 1.5.1?


 Many thanks,

 Michael

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Schrödinger, LLC

(e) jason.vertr...@schrodinger.com
(o) +1 (603) 374-7120

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will include endpoint security, mobile security and the latest in malware 
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Re: [PyMOL] Intel Video - Please Respond

2012-05-02 Thread Michael Banck
Hi,

On Mon, Apr 09, 2012 at 11:01:35AM -0400, Jason Vertrees wrote:
 The latest commit (3995) should fix this for the Intel card. Try
 pulling the latest (3996) from the open source branch.

That worked splendidly, I am uploading pymol-1.5.0.1 with some
subversion changesets to Debian now.

Are you going to roll/upload a 1.5.0.4 version with those changes?  That
would be great.  Or does the addition of the plugin manager mean
subversion is now en route to 1.6 or 1.5.1?


Many thanks,

Michael

--
Live Security Virtual Conference
Exclusive live event will cover all the ways today's security and 
threat landscape has changed and how IT managers can respond. Discussions 
will include endpoint security, mobile security and the latest in malware 
threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/
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Re: [PyMOL] Intel Video - Please Respond

2012-04-09 Thread Michael Banck
Hi,

On Thu, Apr 05, 2012 at 08:01:11AM -0400, Jason Vertrees wrote:
 Due to the number of problems that arise when rendering on Intel video
 cards, we're going to automatically disable new rendering features if
 an Intel video card is detected. You will be able to use PyMOL, but
 with the older, slower, uglier rendering. Also, you can override this
 autodetection  by manually setting use_shaders to 1 and
 sphere_mode to 9.
 
 The Intel Express and Intel HD chipsets are the worst offenders, but a
 review also indicated others are problematic as well. If someone has
 an Intel card that works perfectly and renders nicely with shaders,
 please let me know what card it is. To do this, just start PyMOL and
 copy these lines into an email for me:
 
  This Executable Build integrates and extends Open-Source PyMOL 1.5.0.3.
  Detected OpenGL version 2.0 or greater.  Shaders available.
  Detected GLSL version 1.20.
  OpenGL graphics engine:
   GL_VENDOR: XXX
   GL_RENDERER: XXX
   GL_VERSION: XXX
 
 where XXX will vary based on your card. We will attempt to more
 finely detect which Intel cards are good and which are bad so that we
 can still deliver good performance to those whose video cards can
 handle it.

On my Thinkpad T42 with a Radeon R300 (RV350 4E50), pymol-1.5.0.1
segfaults when I run the Representations Demo:

 Detected OpenGL version prior to 2.0.  Shaders and volumes unavailable.
 OpenGL graphics engine:
  GL_VENDOR: DRI R300 Project
  GL_RENDERER: Mesa DRI R300 (RV350 4E50) 20090101 x86/MMX/SSE2 TCL DRI2
  GL_VERSION: 1.5 Mesa 7.7.1
Segmentation fault

On my Tinkpad T400 with Mobile Intel GM45 Express, I see only lines,
mesh and dots in the Representations Demo, and a couple of unsupported
IR in fragement shader 13 messages:

 Detected OpenGL version 2.0 or greater.  Shaders available.
 Detected GLSL version 1.20.
 OpenGL graphics engine:
  GL_VENDOR: Tungsten Graphics, Inc
  GL_RENDERER: Mesa DRI Mobile Intel® GM45 Express Chipset GEM 20091221 2009Q4 
  GL_VERSION: 2.1 Mesa 7.7.1
 Detected 2 CPU cores.  Enabled multithreaded rendering.
unsupported IR in fragment shader 13
unsupported IR in fragment shader 13
unsupported IR in fragment shader 13
unsupported IR in fragment shader 13
unsupported IR in fragment shader 13
unsupported IR in fragment shader 13
unsupported IR in fragment shader 13

This is both on Debian stable.

So I have held off uploading pymol-1.5 to unstable for now and just put
it into experimental.


Michael

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Re: [PyMOL] Intel Video - Please Respond

2012-04-09 Thread Jason Vertrees
Michael,

The latest commit (3995) should fix this for the Intel card. Try
pulling the latest (3996) from the open source branch.

Cheers,

-- Jason

On Mon, Apr 9, 2012 at 10:24 AM, Michael Banck mba...@debian.org wrote:
 Hi,

 On Thu, Apr 05, 2012 at 08:01:11AM -0400, Jason Vertrees wrote:
 Due to the number of problems that arise when rendering on Intel video
 cards, we're going to automatically disable new rendering features if
 an Intel video card is detected. You will be able to use PyMOL, but
 with the older, slower, uglier rendering. Also, you can override this
 autodetection  by manually setting use_shaders to 1 and
 sphere_mode to 9.

 The Intel Express and Intel HD chipsets are the worst offenders, but a
 review also indicated others are problematic as well. If someone has
 an Intel card that works perfectly and renders nicely with shaders,
 please let me know what card it is. To do this, just start PyMOL and
 copy these lines into an email for me:

  This Executable Build integrates and extends Open-Source PyMOL 1.5.0.3.
  Detected OpenGL version 2.0 or greater.  Shaders available.
  Detected GLSL version 1.20.
  OpenGL graphics engine:
   GL_VENDOR: XXX
   GL_RENDERER: XXX
   GL_VERSION: XXX

 where XXX will vary based on your card. We will attempt to more
 finely detect which Intel cards are good and which are bad so that we
 can still deliver good performance to those whose video cards can
 handle it.

 On my Thinkpad T42 with a Radeon R300 (RV350 4E50), pymol-1.5.0.1
 segfaults when I run the Representations Demo:

  Detected OpenGL version prior to 2.0.  Shaders and volumes unavailable.
  OpenGL graphics engine:
  GL_VENDOR: DRI R300 Project
  GL_RENDERER: Mesa DRI R300 (RV350 4E50) 20090101 x86/MMX/SSE2 TCL DRI2
  GL_VERSION: 1.5 Mesa 7.7.1
 Segmentation fault

 On my Tinkpad T400 with Mobile Intel GM45 Express, I see only lines,
 mesh and dots in the Representations Demo, and a couple of unsupported
 IR in fragement shader 13 messages:

  Detected OpenGL version 2.0 or greater.  Shaders available.
  Detected GLSL version 1.20.
  OpenGL graphics engine:
  GL_VENDOR: Tungsten Graphics, Inc
  GL_RENDERER: Mesa DRI Mobile Intel® GM45 Express Chipset GEM 20091221 2009Q4
  GL_VERSION: 2.1 Mesa 7.7.1
  Detected 2 CPU cores.  Enabled multithreaded rendering.
 unsupported IR in fragment shader 13
 unsupported IR in fragment shader 13
 unsupported IR in fragment shader 13
 unsupported IR in fragment shader 13
 unsupported IR in fragment shader 13
 unsupported IR in fragment shader 13
 unsupported IR in fragment shader 13

 This is both on Debian stable.

 So I have held off uploading pymol-1.5 to unstable for now and just put
 it into experimental.


 Michael

 --
 For Developers, A Lot Can Happen In A Second.
 Boundary is the first to Know...and Tell You.
 Monitor Your Applications in Ultra-Fine Resolution. Try it FREE!
 http://p.sf.net/sfu/Boundary-d2dvs2
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-- 
Jason Vertrees, PhD
PyMOL Product Manager
Schrödinger, LLC

(e) jason.vertr...@schrodinger.com
(o) +1 (603) 374-7120

--
For Developers, A Lot Can Happen In A Second.
Boundary is the first to Know...and Tell You.
Monitor Your Applications in Ultra-Fine Resolution. Try it FREE!
http://p.sf.net/sfu/Boundary-d2dvs2
___
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[PyMOL] Intel Video - Please Respond

2012-04-05 Thread Jason Vertrees
Greetings,

Due to the number of problems that arise when rendering on Intel video
cards, we're going to automatically disable new rendering features if
an Intel video card is detected. You will be able to use PyMOL, but
with the older, slower, uglier rendering. Also, you can override this
autodetection  by manually setting use_shaders to 1 and
sphere_mode to 9.

The Intel Express and Intel HD chipsets are the worst offenders, but a
review also indicated others are problematic as well. If someone has
an Intel card that works perfectly and renders nicely with shaders,
please let me know what card it is. To do this, just start PyMOL and
copy these lines into an email for me:

 This Executable Build integrates and extends Open-Source PyMOL 1.5.0.3.
 Detected OpenGL version 2.0 or greater.  Shaders available.
 Detected GLSL version 1.20.
 OpenGL graphics engine:
  GL_VENDOR: XXX
  GL_RENDERER: XXX
  GL_VERSION: XXX

where XXX will vary based on your card. We will attempt to more
finely detect which Intel cards are good and which are bad so that we
can still deliver good performance to those whose video cards can
handle it.

Cheers,

-- Jason

-- 
Jason Vertrees, PhD
PyMOL Product Manager
Schrödinger, LLC

(e) jason.vertr...@schrodinger.com
(o) +1 (603) 374-7120

--
Better than sec? Nothing is better than sec when it comes to
monitoring Big Data applications. Try Boundary one-second 
resolution app monitoring today. Free.
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