Re: [PyMOL] Loading chempy objects into PyMOL 2.4.0

Dear Thomas, Thanks! That solved the problem (I actually used load_coordset, so I could keep my coordinates in their original order. Cheers! On Wed, Dec 1, 2021 at 6:44 PM Thomas Holder wrote: > Hi Raul, > > I suggest to use cmd.load_coords() to add trajectory frames to your model. > > https:/

Re: [PyMOL] Loading chempy objects into PyMOL 2.4.0

Hi Raul, I suggest to use cmd.load_coords() to add trajectory frames to your model. https://pymolwiki.org/index.php/Load_coords Cheers, Thomas > On Nov 30, 2021, at 21:49, R Mera wrote: > > Dear all, > > I am trying to implement a reader for

[PyMOL] Loading chempy objects into PyMOL 2.4.0

Dear all, I am trying to implement a reader for a trajectory format. I use cmd.get_model to get the "reference" structure, and then iterate over the trajectory frames, everytime replacing the coordinates of my model with the ones from the trajectory, and then loading the modified model back into P