Re: [PyMOL] Pymol molecular visualisation

2015-04-13 Thread Sampson, Jared
Hi James - Here is how I would label your objects in grid_mode: # For each object, create a pseudoatom at its center of geometry to position the label pseudoatom myobj_label, myobj # Set the label text for the pseudoatom label myobj_label, "My Object" # To show the label and the object in the

Re: [PyMOL] Pymol molecular visualisation

2015-04-12 Thread James Starlight
Thanks ! still have not found solution for grid-mode display: 1- I need to show names of each opened object near its cartoon 2- I need to increase spacing of grid border (m.b like just empty space)- to better discriminate between opened objects in case of its high zooming J 2015-04-11 14:51 GMT+

Re: [PyMOL] Pymol molecular visualisation

2015-04-11 Thread João M . Damas
1- See http://www.pymolwiki.org/index.php/Ray_Trace_Gain. However, from my experience, I don't think the setting works too well, so what I usually do is to increase the resolution of the raytrace, which makes the black outline thinner. On Fri, Apr 10, 2015 at 4:48 PM, James Starlight wrote: > De