Re: [PyMOL] Saving trajectory outputs

2014-07-28 Thread Thomas Holder
Hi James, you can save multi-model PDBs with state=0: PyMOL> save trajectory.pdb, state=0 There is also a "save_traj" function in PSICO which can write DCD format: http://pymolwiki.org/index.php/Psico The latter is based on the "save2traj" script by Sean Law: http://pymolwiki.org/index.php/Save2

[PyMOL] Saving trajectory outputs

2014-07-25 Thread James Starlight
Dear Pymol Users! I wounder whether it will be possible to save big ensemble of the loaded into pymol Pdb's files as the trajectory output (like dcd format) what are actually can be performed by vmd (e.g by means of http://www.ks.uiuc.edu/Research/vmd/script_library/scripts/animatepdbs/). The pro