Hi James -
For the first part, you should use split_states and super or cealign, as in my
response to one of your emails last month.
https://sourceforge.net/p/pymol/mailman/message/35156097/
Then, once you have aligned all the trajectory structures (let's say they're
called traj_01 through tra
Dear Pymol Users!
Here I desice to continue my topic regarding scripting in Pymol;
My current task:
I have 1 X-ray structure of cythochrome-C with HEME residue embedded
within the protein as a cofactor
I have 10 snapshots of cythochrome-C from MD trajectory where HEME was
not present explicitly
