Re: [PyMOL] coloring based on sequence identity

2008-08-25 Thread Robert Campbell
Dear Morri, On Fri, 22 Aug 2008 13:35:32 -0700, Morri Feldman morrifeld...@gmail.com wrote: Dear Rob, I'm interested in using your variability script with a substitution matrix. Would you please send me an example of a substitution matrix file? Thanks for writing such a useful script.

[PyMOL] coloring based on sequence identity

2007-06-26 Thread Eva Vanamee
Hi, I'd like to color a molecule based on its sequence similarity to another molecule. Can this be done in Pymol? Thanks in advance. - Eva

Re: [PyMOL] coloring based on sequence identity

2007-06-26 Thread Martin Höfling
Am Dienstag, 26. Juni 2007 schrieb Eva Vanamee: Hi, I'd like to color a molecule based on its sequence similarity to another molecule. Can this be done in Pymol? If you can quantify similarity in a number you can write it into the b-factors of the atoms and then color it by them. Best