Re: [PyMOL] naming of chain id

2014-09-17 Thread Thomas Holder
Hi Spencer, multi-letter chain IDs of arbitrary length will be available in the next PyMOL version. It's in fact already available with the latest updates in our open-source SVN repository on sourceforge. Cheers, Thomas On 17 Sep 2014, at 06:36, Spencer Bliven wrote: > Are there plans to s

Re: [PyMOL] naming of chain id

2014-09-17 Thread Spencer Bliven
Are there plans to support 4-letter chain IDs, as defined by the current xPDB/mmCIF specification? -Spencer On Tue, Sep 16, 2014 at 3:36 PM, Thomas Holder < thomas.hol...@schrodinger.com> wrote: > Hi Folmer and Yeping, > > to support upper and lower case letters, set this setting: > > PyMOL> set

Re: [PyMOL] naming of chain id

2014-09-16 Thread Thomas Holder
Hi Folmer and Yeping, to support upper and lower case letters, set this setting: PyMOL> set ignore_case, off Cheers, Thomas On 16 Sep 2014, at 02:44, Folmer Fredslund wrote: > Hi Yeping Sun, > > Did you solve your problem? > > According to http://www.wwpdb.org/procedure.html#toc_4 > " > Wh

Re: [PyMOL] naming of chain id

2014-09-15 Thread Folmer Fredslund
Hi Yeping Sun, Did you solve your problem? According to http://www.wwpdb.org/procedure.html#toc_4 " What is the maximum number of chain IDs in a file? Up to 62 chains can be included in the PDB entry. Upper case letters and numbers (0-9) should be used first for chain IDs. Lower case letters sho

[PyMOL] naming of chain id

2014-09-02 Thread sunyeping
I have a protein which contains 32 chains. By using A-Z can only name 26 chains. Can I use expression containing two character such as A1, AB, etc. to as chain id? Will this change the format of the pdb files? Yeping Sun Institute of Microbiology, Chinese Academy of Sciences -