Hi,
I am trying to use the comand cmd.super() to calculate the rmsd between the
sidechains of two proteins using
cmd.super('%s and not name ca+c+o+n' % obj0, '%s and not name ca+c+o+n' %
obj1)
And I get this error
ExecutiveAlign: invalid selections for alignment.
It seems to me that the
Hi Osvaldo,
The problem can be understood from the description of 'super'.
#-
PyMOLhelp super
DESCRIPTION
NOTE: This feature is experimental and unsupported.
super performs a residue-based pairwise alignment followed by a
structural superposition,
Thanks for the clarification.
Osvaldo.
On Thu, Nov 28, 2013 at 2:11 PM, Tsjerk Wassenaar tsje...@gmail.com wrote:
Hi Osvaldo,
The problem can be understood from the description of 'super'.
#-
PyMOLhelp super
DESCRIPTION
NOTE: This feature is experimental