Re: [PyMOL] selecting multiple, non-adjacent chains
Sean, There is also a more concise option: select allothers, chain 0:4+C:J+L:Z Or even more concise, using selection macro: chain/residue/atom select allothers, 0:4+C:J+L:Z// Cheers, Warren -Original Message- From: Marius Retegan [mailto:marius.s.rete...@gmail.com] Sent: Thursday, October 15, 2009 7:13 AM To: Sean Moore Cc: pymol-users@lists.sourceforge.net Subject: Re: [PyMOL] selecting multiple, non-adjacent chains Try this one select allothers, chain 0:4 or chain C:J or chain L:Z Marius On Thu, Oct 15, 2009 at 3:34 PM, Sean Moore semo...@mail.ucf.edu wrote: Hello, I am trying to find an easier way to select multiple chains at once in a large file with many chains (PDB 2i2t). The chain assignments exceed z and start again at 0 at the beginning of the chain list. In an effort to select chain 0-4, skip chain A+B, select chain C-J, skip chain K, and select the remaining L-Z, I have tried (among other things): select allothers, chain 0-4 and C-J and L-Z (the dashes don't seem to work for select) select allothers, chain 0:4 and C:J and L:Z select allothers, chain 0:4 and chain C:J and chain L:Z select allothers, (chain 0:4) and (chain C:J) and (chain L:Z) selecting chain 0+4 works, and selecting chain 0:4 works. As it stands I have to click all of the chains then rename the selection which leads to mistakes. Any help is appreciated. -- Come build with us! The BlackBerry(R) Developer Conference in SF, CA is the only developer event you need to attend this year. Jumpstart your developing skills, take BlackBerry mobile applications to market and stay ahead of the curve. Join us from November 9 - 12, 2009. Register now! http://p.sf.net/sfu/devconference ___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net -- Come build with us! The BlackBerry(R) Developer Conference in SF, CA is the only developer event you need to attend this year. Jumpstart your developing skills, take BlackBerry mobile applications to market and stay ahead of the curve. Join us from November 9 - 12, 2009. Register now! http://p.sf.net/sfu/devconference ___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net -- Come build with us! The BlackBerry(R) Developer Conference in SF, CA is the only developer event you need to attend this year. Jumpstart your developing skills, take BlackBerry mobile applications to market and stay ahead of the curve. Join us from November 9 - 12, 2009. Register now! http://p.sf.net/sfu/devconference ___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
[PyMOL] selecting multiple, non-adjacent chains
Hello, I am trying to find an easier way to select multiple chains at once in a large file with many chains (PDB 2i2t). The chain assignments exceed z and start again at 0 at the beginning of the chain list. In an effort to select chain 0-4, skip chain A+B, select chain C-J, skip chain K, and select the remaining L-Z, I have tried (among other things): select allothers, chain 0-4 and C-J and L-Z (the dashes don't seem to work for select) select allothers, chain 0:4 and C:J and L:Z select allothers, chain 0:4 and chain C:J and chain L:Z select allothers, (chain 0:4) and (chain C:J) and (chain L:Z) selecting chain 0+4 works, and selecting chain 0:4 works. As it stands I have to click all of the chains then rename the selection which leads to mistakes. Any help is appreciated. -- Come build with us! The BlackBerry(R) Developer Conference in SF, CA is the only developer event you need to attend this year. Jumpstart your developing skills, take BlackBerry mobile applications to market and stay ahead of the curve. Join us from November 9 - 12, 2009. Register now! http://p.sf.net/sfu/devconference ___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
Re: [PyMOL] selecting multiple, non-adjacent chains
Try this one select allothers, chain 0:4 or chain C:J or chain L:Z Marius On Thu, Oct 15, 2009 at 3:34 PM, Sean Moore semo...@mail.ucf.edu wrote: Hello, I am trying to find an easier way to select multiple chains at once in a large file with many chains (PDB 2i2t). The chain assignments exceed z and start again at 0 at the beginning of the chain list. In an effort to select chain 0-4, skip chain A+B, select chain C-J, skip chain K, and select the remaining L-Z, I have tried (among other things): select allothers, chain 0-4 and C-J and L-Z (the dashes don't seem to work for select) select allothers, chain 0:4 and C:J and L:Z select allothers, chain 0:4 and chain C:J and chain L:Z select allothers, (chain 0:4) and (chain C:J) and (chain L:Z) selecting chain 0+4 works, and selecting chain 0:4 works. As it stands I have to click all of the chains then rename the selection which leads to mistakes. Any help is appreciated. -- Come build with us! The BlackBerry(R) Developer Conference in SF, CA is the only developer event you need to attend this year. Jumpstart your developing skills, take BlackBerry mobile applications to market and stay ahead of the curve. Join us from November 9 - 12, 2009. Register now! http://p.sf.net/sfu/devconference ___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net -- Come build with us! The BlackBerry(R) Developer Conference in SF, CA is the only developer event you need to attend this year. Jumpstart your developing skills, take BlackBerry mobile applications to market and stay ahead of the curve. Join us from November 9 - 12, 2009. Register now! http://p.sf.net/sfu/devconference ___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
